Interaction between ribosomal protein L20 and 23S RNA: direct probing with optical tweezers

This thesis is focused on force measurements applied to single RNA alone or associated with a protein. One of the biggest challenges arising when studying RNA comes from its structure, essentially because the interactions taking place are not reduced to the Watson-Crick base pairs and tertiary interactions are frequent. Force measurements give complementary information compared to classical bulk measurements, because they enable to probe directly the complex interactions in RNA and give an access to thermodynamical parameters which are not accessible in another way. However, an adapted and optimized setup has to be designed before accessing the features of this kind of measurement. The first part of the thesis focused on the conception of a double optical tweezers. It is adapted to the study of RNA and achieves a resolution of one base pair. This has mainly been possible thanks to the implementation of new techniques in the apparatus. Next we used our setup to work on biological issues. We probed the interaction between the ribosomal protein L20 with its target RNA in the ribosome. We show that this protein which is very important during the first steps of the ribosome assembly, stabilizes strongly its target RNA. We found its binding site with a resolution of three bases. We started the mechanical characterisation of RNA prepared to observe the activity of DEAD box helicases.

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Source https://theses.hal.science/tel-00873738
Author Mangeol, Pierre
Maintainer CCSD
Last Updated May 9, 2026, 08:38 (UTC)
Created May 9, 2026, 08:38 (UTC)
Identifier tel-00873738
Language fr
Rights https://about.hal.science/hal-authorisation-v1/
contributor Nanobiophysique ; Ecole Superieure de Physique et de Chimie Industrielles de la Ville de Paris (ESPCI Paris) ; Université Paris Sciences et Lettres (PSL)-Université Paris Sciences et Lettres (PSL)-Centre National de la Recherche Scientifique (CNRS)
creator Mangeol, Pierre
date 2009-12-04T00:00:00
harvest_object_id 7f247c92-aebc-4f38-801b-fcc1ecabdeab
harvest_source_id 3374d638-d20b-4672-ba96-a23232d55657
harvest_source_title test moissonnage SELUNE
metadata_modified 2026-04-02T00:00:00
set_spec type:THESE