New methods for continuous microorganism separation from biological samples within a microsystem

Extraction of pathogens from a biological sample is a key step for efficient diagnostic tests of infectious diseases. For bloodstream infections, current diagnostic methods are usually based on bacterial growth and take several days to provide valuable information. An accelerated result would have a high medical value to adjust therapeutic strategies. The aim of this study is to design a new approach for separation and concentration of microorganisms directly from a blood sample, to avoid time-consuming growth stages. We report a method based on two different microsystems connected in series: it combines modification of conductivity and osmolarity of the sample with generic capture of microorganisms by dielectrophoresis. First we explore the impact of conductivity and osmolarity on the dielectric properties of blood cells and microorganisms. Dilution and acoustic forces are both analyzed to transfer blood cells and microorganisms to the optimized buffer. Then we demonstrate the feasibility of achieving the dielectrophoretic separation of microorganisms from blood cells in a low conductivity and low osmolarity medium inside a fluidic device. The structure of the device is optimized with numerical simulations and experiments performed on blood samples and various microorganisms (E. coli, S. epidermidis and C. albicans).The generic capture of microorganisms is validated, and we achieved a separation of 97% efficiency with E. coli, with an optimal inlet velocity around 100-200 µm.s-1. Finally, we propose an improved microsystem to perform the sample preparation step on a larger volume (1-10mL) in a few hours, in order to fit the medical need.

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Source https://theses.hal.science/tel-00957785
Author Bisceglia, Émilie
Maintainer CCSD
Last Updated May 6, 2026, 02:10 (UTC)
Created May 6, 2026, 02:10 (UTC)
Identifier NNT: 2013DENS0042
Language fr
Rights https://about.hal.science/hal-authorisation-v1/
contributor Systèmes et Applications des Technologies de l'Information et de l'Energie (SATIE) ; École normale supérieure - Cachan (ENS Cachan)-Université Paris-Sud - Paris 11 (UP11)-Institut Français des Sciences et Technologies des Transports, de l'Aménagement et des Réseaux (IFSTTAR)-École normale supérieure - Rennes (ENS Rennes)-Université de Cergy Pontoise (UCP) ; Université Paris-Seine-Université Paris-Seine-Conservatoire National des Arts et Métiers [Cnam] (Cnam)-Centre National de la Recherche Scientifique (CNRS)
creator Bisceglia, Émilie
date 2013-11-07T00:00:00
harvest_object_id cf052425-823a-4961-bd01-31ffe30891a4
harvest_source_id 3374d638-d20b-4672-ba96-a23232d55657
harvest_source_title test moissonnage SELUNE
metadata_modified 2026-03-31T00:00:00
set_spec type:THESE