Mountain soils are major reservoirs of carbon (C), potentially vulnerable to climate and land use changes that affect them significantly. However, the great variability of these soils, their limited accessibility and the lack of appropriate measurement tools restrict our knowledge. Today, our comprehension of the biogeochemistry of mountain soils remains very incomplete regarding stocks, chemistry and reactivity of soil organic carbon (SOC). Yet this information is necessary to understand the evolution of soil carbon in the current context of global change. The objectives of this work were (i) to gain a better understanding of the nature, stability and vulnerability of SOC in a mosaic of ecosystems in a calcareous massif in the Alps (Vercors massif), (ii) to search for fast and reliable characterization tools, suitable for the study and monitoring of COS at the landscape scale, and (iii) to propose indicators for the assessment and monitoring of soil quality in mountain regions. As a first step, we tested the application of Rock-Eval pyrolysis for the study of COS at large-scale on a set of ecosystem units. Then, we compared the Rock-Eval approach to two conventional techniques for soil organic matter (SOM) study: the particle-size fractionation of SOM, and the mid-infrared spectroscopy. These coupled analytical approaches allowed us to quantify C stocks across the study area, and explain the stability and the vulnerability of COS at various angles. Factors responsible for the patterns observed in the different eco-units are discussed. This work also confirmed the relevance of the Rock-Eval tool to achieve our previous objectives. Biological approaches allowed us to assess the significance of microbial pool in these soils. Finally, indices assessing the status of SOM (SOC storage, soil fertility, vulnerability COS) were proposed and constituted interesting management tools for decision-makers.