Analysis of Spike-train Statistics with Gibbs Distributions: Theory, Implementation and Applications

We propose a generalization of the existing maximum entropy models used for spike trains statistics analysis. We bring a simple method to estimate Gibbs distributions, generalizing existing approaches based on Ising model or one step Markov chains to arbitrary parametric potentials. Our method enables one to take into account memory effects in dynamics. It provides directly the Kullback-Leibler divergence between the empirical statistics and the statistical model. It does not assume a specific Gibbs potential form and does not require the assumption of detailed balance. Furthermore, it enables the comparison of different statistical models and offers a control of finite-size sampling effects, inherent to empirical statistics, by using large deviations results. A numerical validation of the method is proposed. Applications to biological data of multi-electrode recordings from retina ganglion cells in animals are presented. Additionally, our formalism permits to study the evolution of the distribution of spikes caused by the variation of synaptic weights induced by synaptic plasticity. We provide an application to the analysis of synthetic data from a simulated neural network under Spiketime Dependent Plasticity STDP.

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Source https://theses.hal.science/tel-00851209
Author Vasquez Betancur, Juan Carlos
Maintainer CCSD
Last Updated May 10, 2026, 03:00 (UTC)
Created May 10, 2026, 03:00 (UTC)
Identifier tel-00851209
Language en
Rights https://about.hal.science/hal-authorisation-v1/
contributor Neurosciences Mathématique et Computationnelle (NEUROMATHCOMP) ; Centre Inria d'Université Côte d'Azur ; Institut National de Recherche en Informatique et en Automatique (Inria)-Institut National de Recherche en Informatique et en Automatique (Inria)-INRIA Rocquencourt ; Institut National de Recherche en Informatique et en Automatique (Inria)-École normale supérieure - Paris (ENS-PSL) ; Université Paris Sciences et Lettres (PSL)-Université Paris Sciences et Lettres (PSL)-Université Nice Sophia Antipolis (1965 - 2019) (UNS)-Centre National de la Recherche Scientifique (CNRS)
creator Vasquez Betancur, Juan Carlos
date 2011-03-07T00:00:00
harvest_object_id 7cbe0fcc-db01-482b-8e89-45acaca6192b
harvest_source_id 3374d638-d20b-4672-ba96-a23232d55657
harvest_source_title test moissonnage SELUNE
metadata_modified 2025-08-26T00:00:00
set_spec type:THESE