One important issue of research in Ecology is to understand how anthropogenic activities are influencing biodiversity and what are the consequences on ecosystem functioning. The aim of the study is to improve the knowledge of the mechanisms governing aquatic plant communities, particularly those related to human disturbance and eutrophication. Meta-ecosystems constituted by networks of fish-farming shallow lakes are study models adapted to our problematic because they are submitted to a strong anthropogenic pressure and because they show a high environmental variability. First, we studied the impact of watershed management practices on shallow lakes eutrophication. In a second step, we measured eutrophication effect on productivity and on diversity of phytoplankton communities. Finally, we were able to link 3 types of constraints generated by human practices (eutrophication, drying and connectivity between shallow lakes) to aquatic plant communities in terms of specific and functional diversity. The impact of eutrophication, recruitment and establishment of aquatic plant communities has been approached through the relationship between the seed bank and established vegetation. Eutrophication is the major factor responsible for the loss of plant biodiversity in shallow lakes. However frequent disturbances due to drying events induce a cyclic succession that helps maintain a high biodiversity.
