Analyzing individual-based models of microbial systems

There is a debate in ecology between those favoring simple aggregated mathematical models containing only a few equations expressing a small number of general principles and thosepreferring complex individual-based models that are more structurally realistic with a more detailedrepresentation of the basic processes and interactions at the level of the individuals. In this thesis we attempt to bridge these two approaches by derivingdeterministic moment approximation models of microbial individual-based models. We illustrate the approach on the example of biofilm growth with immotile and motile bacteria. we show that moment models can capture the main features of spatial patterns that arise in simplified biofilm individual-based models. Finally we assess the limitation of the moment models in capturing the e ect of the local uctuation of the individual's environment.

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Source https://theses.hal.science/tel-00712153
Author Mabrouk, Nabil
Maintainer CCSD
Last Updated November 6, 2026, 03:03 (UTC)
Created November 6, 2026, 03:03 (UTC)
Identifier NNT: 2010CLF22008
Language fr
Rights https://about.hal.science/hal-authorisation-v1/
contributor Water Resource Modeling (MERE) ; Centre Inria d'Université Côte d'Azur ; Institut National de Recherche en Informatique et en Automatique (Inria)-Institut National de Recherche en Informatique et en Automatique (Inria)-Institut National de la Recherche Agronomique (INRA)
creator Mabrouk, Nabil
date 2010-01-07T00:00:00
harvest_object_id 6715f794-c265-4740-9d3a-0071d4e4c620
harvest_source_id 3374d638-d20b-4672-ba96-a23232d55657
harvest_source_title test moissonnage SELUNE
metadata_modified 2025-08-26T00:00:00
set_spec type:THESE