Model performance analysis for Bayesian biomass dynamics models using bias, precision and reliability metrics

Bayesian observation error (OEM), process error (PEM) and state-space (SSM) implementations of a Fox biomass dynamics model are compared using a simulation-estimation approach and by applying them to data for the octopus fishery off Mauritania. Estimation performance is evaluated in terms of bias, precision, and reliability measured by the extreme tail-area probability and the mean highest posterior density interval. The PEM generally performs poorest of the three methods in terms of the these performance metrics. In contrast, the OEM is precise, but under-represents uncertainty. The OEM is outperformed by the SSM in terms of its ability to provide posterior distributions which adequately capture parameter uncertainty. It is key to consider the above four metrics when comparing estimation performance in a Bayesian context. Finally, although model performance measures are useful, there is still a need to examine goodness of fit statistics in actual applications.

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Additional Info

Field Value
Source ISSN: 0165-7836
Author Ono, K., Punt, Ae., Rivot, Etienne
Maintainer CCSD
Last Updated May 10, 2026, 12:10 (UTC)
Created May 10, 2026, 12:10 (UTC)
Identifier hal-00840507
Language en
contributor Écologie et santé des écosystèmes (ESE) ; Institut National de la Recherche Agronomique (INRA)-AGROCAMPUS OUEST
creator Ono, K.
date 2012-05-10T00:00:00
harvest_object_id 31359055-6d35-4b2b-a152-a8845ac2c640
harvest_source_id 3374d638-d20b-4672-ba96-a23232d55657
harvest_source_title test moissonnage SELUNE
metadata_modified 2025-03-21T00:00:00
relation info:eu-repo/semantics/altIdentifier/doi/10.1016/j.fishres.2012.02.022
set_spec type:ART