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Intracellular Signaling Mediators in the Circulatory and Ventilatory Systems.
International audience -
Comparison of biological networks
The comparison of biological networks is now one of the most promising approaches that help in understanding the functioning of living organisms. It appears as the... -
Perfect Sorting by Reversals
In computational biology, gene order data is often modelled as signed permutations. A classical problem in genome comparison is to detect conserved segments in a... -
Experimental and computational validation of models of fluorescent and lumine...
International audience -
Building species trees from larger parts of phylogenomic databases
International audience -
Prediction and pattern matching algorithms for RNA multi-structures
RNA (ribonucleic acid) molecules have various functions in cells. Just as they can store and deliver the DNA message for the protein synthesis (messenger RNAs), they... -
Classification of coding and non-coding RNAs
The work described in this thesis is part of the analysis of biological phenomena using computers, id est bioinformatics. More precisely, we are interested in nucleic... -
Algebraic Dynamic Programming 2.0
International audience -
Algorithmic Contributions to Computational Molecular Biology
Nous présentons ici nos résultats de recherche depuis 2001 sur l'algorithmique des graphes linéaires, la recherche de motif (avec ou sans topologie) dans les graphes,... -
Conservation biology: Cats, rats and seabirds
International audience -
Enumerating functional substructures of genome-scale metabolic networks : sto...
In this thesis, we presented three different methods for enumerating special subnetworks containedin a metabolic network: metabolic stories, minimal precursor sets and... -
IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB), Spe...
IEEE/ACM Trans. Comput. Biol. Bioinformatics 10, 4 (July 2013) -
Applications of machine learning in computational biology
Biotechnologies came to an era where the amount of information one has access to allows to think about biological objects as complex systems. In this context, the... -
Design, optimization and control in systems and synthetic biology
How good is our understanding of the way cells treat information and make decisions? To what extend our current understanding enables us to reprogram and control the...
